Tutorials

The following notebooks provide examples of how to use the Comet library for various analyses.

Tip

The notebooks are included in the tutorials/ folder of the toolbox and can be downloaded from GitHub: https://github.com/mibur1/comet

Note

This page is actively being updated. Additional tutorials will be added over time.

Dynamic Functional Connectivity (dFC)

General Introduction

• Continuously varying dFC
• State-based dFC
• State-based dFC for continuously varying measures
• State-based dFC for voxelwise analysis

Data Handling

• Preparing NIfTI data for connectivity analysis
• Preparing CIFTI data for connectivity analysis
• Preparing fMRIprep data for connectivity analysis

Graph Analysis

• Graph measures
• Performance improvements for computationally expensive measures

CIFTI Tools

• CIFTI parcellation and surface plotting

Multiverse Analysis

General Introduction

• Multiverse basics
• Loading an existing multiverse
• Visualising a multiverse
• Advanced multiverse structures
• Multiverse recipes

Applications

• Brain-behaviour association simulation example
• Hurricane multiverse (non-neuroimaging)
• Autism classification (resting-state fMRI)
• Dynamic functional connectivity and graph analysis (simulated data)

Graphical User Interface

• Graphical user interface quickstart